ModelConfig

class VmaxBuilder.config.dataclasses.ModelConfig(enabled: bool = True, method: str | None = None, options: dict[str, ~typing.Any]=<factory>, field_validation_modes: dict[str, ~VmaxBuilder.config.enums.ValidationMode]=<factory>, reaction_notation: ReactionNotation = ReactionNotation.STANDARD, make_copy: bool = True, id_type: str = 'ensembl', level: str = 'gene')

Generated: validation needed.

Description:

Configuration for model loading and reaction notation convention.

Parameters:

• reaction_notation (ReactionNotation) – Reaction identifier convention.

• make_copy (bool) – Copy model at preprocessing start before mutation. Default True.

• id_type (str) – Canonical identifier provider expected in model entities.

• level (str) – Gene or transcript level granularity.

Public Methods

reaction_notation
make_copy
id_type
level
enabled
field_validation_modes
method
options