Source code for VmaxBuilder.Kcat.smiles_getters_implementation

"""Generated: validation needed.

Description:
    SMILES getter scaffold implementation for kcat workflows.
"""

from __future__ import annotations

from typing import Any

from VmaxBuilder.config.dataclasses import APIConfig
from VmaxBuilder.core.protocols import Scaffold




class DefaultSmilesGettersImplementation:
    """Generated: validation needed.

    Description:
        Placeholder implementation scaffold for substrate SMILES retrieval.
    """



    def run(self, scaffold: Scaffold, config: APIConfig) -> dict[str, Any]:
        """Generated: validation needed.

        Description:
            Return placeholder payload for SMILES retrieval step.

        Args:
            scaffold (Scaffold): Shared pipeline scaffold.
            config (APIConfig): Root API configuration.

        Returns:
            dict[str, Any]: Placeholder SMILES payload.

        Modifies:
            scaffold metadata payload.
        """

        _ = config
        metadata_payload = scaffold.setdefault("metadata", {}).setdefault("kcat_stage", {})
        metadata_payload["smiles_getters"] = {
            "implementation": type(self).__name__,
            "status": "placeholder_not_implemented",
        }
        return {
            "smiles_mapping": {},
        }